Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAAGATCAACTTAACTCCCTAGCAGCAGTAGT
((((.(((((..(((((((((&)))))))))..................))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014590
GeneSymbolERVW-1
Binding site2141,2179
Score0.846
Seed0
Au0.559
Energy-19.7
Binding len38
Me-14.228
Phylopstem0.14819700000000002
Phylopflank0.050713712500000015
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure