Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCCAAGCGCCAGTGCAATCGCCATTACTGCTGGGAGAAGCTGCGGC
(((((((((((((((((.(((&.)))..)))))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014593
GeneSymbolCXXC1
Binding site1844,1895
Score0.923
Seed1
Au0.368
Energy-22.8
Binding len40
Me-3.938
Phylopstem1.7345588606060602
Phylopflank1.3982988487499997
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure