Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGCCTGAGAGTGCAGCTGCC
..(((((((((.((...((((&.))))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014599
GeneSymbolMAGED2
Binding site572,597
Score0.923
Seed1
Au0.397
Energy-24.6
Binding len20
Me-9.272
Phylopstem1.0517674444444447
Phylopflank1.2245147750000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure