Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGAGGCGATGGAAGCGGATTTGAAGGCTGCAGCTGAGGCTGCAGC
((((((((.((((((((....&.)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014599
GeneSymbolMAGED2
Binding site1540,1589
Score0.808
Seed1
Au0.426
Energy-23.4
Binding len19
Me-4.994
Phylopstem1.4353392249999999
Phylopflank2.5014408175000002
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure