Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGCGGGCAGCTGCAGG
(((((((((((.((((.....&)))).)..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014600
GeneSymbolEHD3
Binding site2560,2579
Score1.0
Seed1
Au0.412
Energy-21.5
Binding len19
Me-7.284
Phylopstem-0.4964795384615384
Phylopflank0.05392458724999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure