Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCAATGCACCCTCTGTATCAGTCCTGGGTGATTGCAGCTGTT
..((((((((((((...(((.&.)))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014602
GeneSymbolPIK3R4
Binding site4123,4170
Score0.923
Seed1
Au0.471
Energy-21.2
Binding len21
Me-5.925
Phylopstem5.3410089166666666
Phylopflank4.24662331775
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure