Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGGTGGCCGGGG
.((((((.(((..(((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353345
GeneSymbolSETD1B
Binding site1248,1263
Score0.846
Seed1
Au0.338
Energy-17.3
Binding len15
Me-10.743
Phylopstem0.7643873333333334
Phylopflank1.9686534519999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure