Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTTTAAGGAGCTAGA
..((((((((((...((((((.&))))))...)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353345
GeneSymbolSETD1B
Binding site5048,5068
Score0.923
Seed1
Au0.412
Energy-28.2
Binding len20
Me-7.838
Phylopstem2.6965174
Phylopflank1.18187361875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure