Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTACACACAACTGCAGCTT
....(((((((((((((((((&))))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014613
GeneSymbolFAF2
Binding site2220,2243
Score0.846
Seed0
Au0.515
Energy-23.0
Binding len23
Me-9.547
Phylopstem0.13630420454545455
Phylopflank0.16395817625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure