Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACCCTACAGAATACTGCAGTGTGCCAGGTG
(((((((((((..(((((((((&.)))).)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014614
GeneSymbolPSME4
Binding site2399,2433
Score0.923
Seed1
Au0.544
Energy-25.3
Binding len23
Me-8.574
Phylopstem5.354111454545454
Phylopflank4.721893597499999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure