Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGCGGCCGCCGCTGCC
..(((((.(((((((((.(((&)))..))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353345
GeneSymbolSETD1B
Binding site2633,2654
Score0.846
Seed0
Au0.294
Energy-27.6
Binding len21
Me-7.271
Phylopstem0.3406677777777778
Phylopflank2.84916854
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure