Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACGGCTGAGTATGAGCCAGGCTGCT
..((((((.((((((((((((&))))))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014618
GeneSymbolBRINP1
Binding site209,239
Score0.846
Seed1
Au0.368
Energy-20.5
Binding len30
Me-6.013
Phylopstem1.6336917666666666
Phylopflank2.1972126425000003
Longest consecutive pairings12
Position of longest consecutive pairings18
Pairings in 3prime end8
Position5UTR
2D Structure