Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCTGCGGGCGGATCGGGCTGGAGCCGCCACGGCTGCTGCGGA
(((((((((((((((.(((((&)))))))))))))............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014619
GeneSymbolGRIK4
Binding site5,54
Score0.846
Seed1
Au0.279
Energy-23.0
Binding len49
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings36
Pairings in 3prime end7
Position5UTR
2D Structure