Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGCCTTCCTGACCGTGCAGCGCAT
.(((.(((((((((((.((((&)))).))))))...........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014619
GeneSymbolGRIK4
Binding site2213,2244
Score0.846
Seed0
Au0.382
Energy-22.5
Binding len31
Me-7.912
Phylopstem5.273946863636364
Phylopflank5.83240979875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure