Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGCTGAGCCGAAGCTGCGGG
((((((((.(((((((..(((&)))..))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014621
GeneSymbolHOXD4
Binding site885,909
Score0.846
Seed1
Au0.279
Energy-20.7
Binding len24
Me-4.994
Phylopstem1.7337538749999997
Phylopflank2.4744093275
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure