Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCCGCGCTGCT
..(((((.((((..((.....&))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014625
GeneSymbolNPHS2
Binding site44,58
Score0.846
Seed0
Au0.25
Energy-18.2
Binding len14
Me-9.417
Phylopstem0.7525499999999999
Phylopflank0.22055230499999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure