Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGCCACCGATTCAGCTGCC
..(((((((.((((((.((((&)))).)))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014631
GeneSymbolSH3PXD2A
Binding site5283,5309
Score0.923
Seed1
Au0.397
Energy-22.8
Binding len26
Me-6.2
Phylopstem1.3715388
Phylopflank0.56972489
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure