Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACGGCGCCAGCTGA
...((((((..((((((((((&))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014631
GeneSymbolSH3PXD2A
Binding site2554,2573
Score0.846
Seed0
Au0.397
Energy-22.6
Binding len19
Me-10.582
Phylopstem1.3238405999999998
Phylopflank1.0293794475000002
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure