Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAGCGGGAGCTGCGGG
((((((((.(.(((.(.....&).))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014633
GeneSymbolCTR9
Binding site2677,2694
Score0.923
Seed1
Au0.456
Energy-18.0
Binding len17
Me-8.554
Phylopstem4.887157500000001
Phylopflank5.245770801775
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure