Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTGCGGTTGCAGA
(((((((((((((((......&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353349
GeneSymbolSPATA21
Binding site1562,1580
Score1.0
Seed1
Au0.382
Energy-23.3
Binding len17
Me-4.171
Phylopstem0.15150404
Phylopflank0.09494318499999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure