Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAGGGCTGCAGCAGCT
..((.(((((((((.(.((((&))))..).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353349
GeneSymbolSPATA21
Binding site399,420
Score0.923
Seed0
Au0.397
Energy-22.3
Binding len21
Me-9.811
Phylopstem0.995756411111111
Phylopflank0.9891376900000001
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure