Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCCGTATGCTGCAC
.((((((((((((((((((((&)))))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014636
GeneSymbolRALGPS1
Binding site5721,5743
Score0.923
Seed1
Au0.397
Energy-33.7
Binding len22
Me-3.793
Phylopstem-0.22147509523809528
Phylopflank0.07133061624999999
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure