Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCGGGCCAGCATCCGCGGCTGCT
..((((((((((.(((..(((&.))).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014638
GeneSymbolPLCH2
Binding site4497,4524
Score1.0
Seed1
Au0.309
Energy-27.2
Binding len20
Me-6.246
Phylopstem-0.41444257
Phylopflank-0.11927278625000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure