Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAGAGCAGCTGCGC
.(((((((((..((((.(((.&))).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014638
GeneSymbolPLCH2
Binding site4193,4212
Score0.923
Seed1
Au0.353
Energy-23.2
Binding len19
Me-9.965
Phylopstem3.992715
Phylopflank0.25168368500000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure