Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAATGCAGAGGATATCATTTCCAGCCCCAGCAGCTGCAGC
(((((((((((((((.(((..&.))).)))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014640
GeneSymbolTTLL4
Binding site3196,3239
Score0.846
Seed1
Au0.382
Energy-22.9
Binding len24
Me-4.171
Phylopstem1.4421319666666665
Phylopflank3.47993321625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure