Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAACAGCCTCAGTAGTTGCAGA
((((((((((((((((.(((.&))).))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014641
GeneSymbolMDC1
Binding site1797,1821
Score1.0
Seed1
Au0.471
Energy-24.7
Binding len24
Me-3.938
Phylopstem0.30716869473684205
Phylopflank0.18220573124999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure