Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTGGAGCAGAGCATTCAGGGGAACAATTGTCTGCGACTGCAGCTGCAAC
(((((((((((((((((....&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014644
GeneSymbolPDE4DIP
Binding site6317,6368
Score1.0
Seed1
Au0.412
Energy-29.9
Binding len19
Me-3.938
Phylopstem1.6828619994117648
Phylopflank1.4339656393750002
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure