Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCACAGTCCGTGGGAAGCGCAGCTGCAGA
(((((((((((.((.(..((.&.))...).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014646
GeneSymbolLPIN2
Binding site1566,1597
Score0.846
Seed1
Au0.368
Energy-25.2
Binding len23
Me-8.02
Phylopstem-0.11059046363636363
Phylopflank-0.04892751625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure