Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACATGGATGGCAGCAGACAAGGAGAGAGAGCTTGTGCAGG
((((((((((.((((((((((&))))))))...)).)))))....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014648
GeneSymbolDZIP3
Binding site4973,5018
Score0.846
Seed1
Au0.529
Energy-18.8
Binding len45
Me-6.762
Phylopstem0.31996230769230777
Phylopflank0.033451850000000026
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end8
Position3UTR
2D Structure