Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTCACACTGCTGTGCCGGGG
.(((((((((((.(((.(((((&))))).))).)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014652
GeneSymbolIPO13
Binding site3486,3509
Score0.897
Seed1
Au0.456
Energy-20.6
Binding len23
Me-5.082
Phylopstem4.803805
Phylopflank5.172006646374999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure