Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGGGGGCTGCAGG
((((((((.(((((((.....&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014652
GeneSymbolIPO13
Binding site668,686
Score0.846
Seed1
Au0.324
Energy-23.7
Binding len18
Me-4.994
Phylopstem1.743712875
Phylopflank2.2581183425000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure