Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACGTGCAGCTGGCAGA
((((((((((((((((.....&))))).)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014652
GeneSymbolIPO13
Binding site2152,2171
Score0.962
Seed1
Au0.456
Energy-21.3
Binding len19
Me-3.938
Phylopstem5.45522131111111
Phylopflank5.6337350475
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure