Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCTTCACCCCTACCTGCTTCCTCCCCACCGCAGCTGGCAGA
(((((((((((((.(..(((.&.)))..).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014654
GeneSymbolSDC3
Binding site2760,2806
Score0.808
Seed1
Au0.338
Energy-25.1
Binding len23
Me-5.027
Phylopstem0.10474007142857145
Phylopflank0.010619622500000078
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure