Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATGGGGTATGCCGGGC
.((((((((((.((((......&))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014661
GeneSymbolFAM53B
Binding site3540,3558
Score0.923
Seed1
Au0.353
Energy-19.8
Binding len18
Me-7.14
Phylopstem0.27428349
Phylopflank-0.026661073750000014
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure