Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGGAAGCAGCTGCTGCTGCT
..(((((.(((((((((((((&)))))....)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014662
GeneSymbolDEPDC5
Binding site5005,5029
Score0.846
Seed0
Au0.485
Energy-23.0
Binding len24
Me-7.271
Phylopstem0.7037889764705882
Phylopflank0.22375997125000002
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure