Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTTTATCCTGAGGACATAGTGAGCCAGGA
.((((((.(((.((((......&.)))).))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014663
GeneSymbolKDM4A
Binding site2960,2992
Score0.865
Seed1
Au0.485
Energy-18.6
Binding len17
Me-9.454
Phylopstem5.980848333333333
Phylopflank5.22160361375
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure