Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAAAGCATCACTGCAGG
((((((.(((..(((((((((&))))))))).)))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014663
GeneSymbolKDM4A
Binding site2825,2848
Score0.904
Seed0
Au0.456
Energy-21.9
Binding len23
Me-11.653
Phylopstem3.0012986666666666
Phylopflank4.8553999625
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure