Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCACGGCCGCTGCCCAACTGCCTTCCATGTGAGCTGCGC
.(((((((((((((((.(((.&))).)))))))).....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014663
GeneSymbolKDM4A
Binding site2684,2725
Score0.846
Seed1
Au0.338
Energy-21.9
Binding len41
Me-3.793
Phylopstem5.063048638888888
Phylopflank5.390773175
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end6
PositionCDS
2D Structure