Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCACTGGAATGCTGTGGCTGCAC
.(((((((((((((((..(((&)))..))).......)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014663
GeneSymbolKDM4A
Binding site3566,3594
Score0.923
Seed1
Au0.397
Energy-21.5
Binding len28
Me-3.793
Phylopstem1.3359811818181822
Phylopflank0.44232937500000014
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure