Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGGAGCAGCAGCA
.....(((((.(((.((((((&)))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014666
GeneSymbolCLINT1
Binding site1031,1048
Score0.846
Seed0
Au0.529
Energy-18.1
Binding len17
Me-17.226
Phylopstem2.3060656666666666
Phylopflank1.0936201293749999
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure