Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCACTGCACTCCTCTGTAGCTGCT
..(((((((((((.(((((((&))))))).))))))..........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014669
GeneSymbolNUP93
Binding site3233,3263
Score0.846
Seed1
Au0.456
Energy-24.2
Binding len30
Me-5.814
Phylopstem-0.3740192619047619
Phylopflank-0.52151072
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure