Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGCTTCTCTACAGTTTAGCCTTTAATGCCAGGTT
(((((((((....((((((...&.))))))............))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014671
GeneSymbolUBE3C
Binding site1676,1711
Score0.846
Seed1
Au0.618
Energy-19.1
Binding len29
Me-12.641
Phylopstem5.4285037777777765
Phylopflank5.0118952
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure