Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGTTCAGACAGGGCTGCACAGGCGGCAGAGATACAGGGTCTG
((((((((((((((((((...&))).......))))))))).................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014671
GeneSymbolUBE3C
Binding site3964,4007
Score0.821
Seed1
Au0.338
Energy-25.7
Binding len43
Me-3.938
Phylopstem-0.4963436404761904
Phylopflank0.7279085762499999
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end5
Position3UTR
2D Structure