Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGGGCCGCTGCTGCT
..(((((.((((((.((.(((&))).)).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014671
GeneSymbolUBE3C
Binding site4018,4038
Score0.923
Seed0
Au0.441
Energy-25.6
Binding len20
Me-8.006
Phylopstem0.20600716666666663
Phylopflank0.44143013875
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure