Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAACCCGGCTGCT
..(((((((.(((((...(((&))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014671
GeneSymbolUBE3C
Binding site2748,2765
Score0.846
Seed1
Au0.485
Energy-22.3
Binding len17
Me-6.433
Phylopstem5.075232428571428
Phylopflank5.487212900000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure