Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAACAGCATGCCTAAAGGTGCAGCTGCC
..(((((((((.((...((((&.))))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014673
GeneSymbolEMC2
Binding site3312,3342
Score1.0
Seed1
Au0.529
Energy-22.7
Binding len20
Me-9.272
Phylopstem-0.2024257
Phylopflank-0.052016335000000025
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure