Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCACAAGCGCCAGCTGCAGG
(((((((((((.((((.(((.&)))..)))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014675
GeneSymbolCROCC
Binding site1668,1691
Score0.846
Seed1
Au0.338
Energy-26.1
Binding len23
Me-7.284
Phylopstem2.4178666166666667
Phylopflank1.32334524375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure