Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGCGGGCCCAGCTGCAGA
(((((((((.((((((..(((&)))..)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014675
GeneSymbolCROCC
Binding site3118,3140
Score0.846
Seed1
Au0.294
Energy-24.6
Binding len22
Me-5.18
Phylopstem0.5082207111111111
Phylopflank1.7530187625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure