Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCACAAGCAGCTGTTGCAGCAGCCGCAGCTTCAGCAAA
((((((((((((((((.....&.))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014676
GeneSymbolPUM1
Binding site1889,1930
Score0.846
Seed1
Au0.441
Energy-25.9
Binding len21
Me-3.938
Phylopstem6.485209894736843
Phylopflank6.039024996249999
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure