Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCTGCAGCTGGAAA
((.((((((((((((......&))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014680
GeneSymbolKIAA0100
Binding site5702,5719
Score1.0
Seed0
Au0.515
Energy-21.4
Binding len17
Me-5.728
Phylopstem4.116440923076922
Phylopflank2.574871237499999
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure